Rrid:scr_001905

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August undefined, 2024

WebNov 18, 2024 · Model reduction, parameter estimation and global sensitivity analysis tools are written in MATLAB ® (RRID:SCR_001622) and require the SimBiology ® toolbox. Conversion script to VFGEN (Weckesser 2008), MOD and SBML (RRID:SCR_007422) is written in R (RRID:SCR_001905). Conversion to SBML requires the use of libSBML … WebOct 24, 2024 · (A) Schematic representation of scRNA-seq pipeline used to analyze individual serotonin neurons. Tissue slices containing either principal dorsal raphe (pDR, n = 6 brains) or entire DR and MR (n = 8 brains) of Sert-Cre;Ai14 adult were dissociated to a single-cell suspension. tdTomato + neurons were FACS-sorted in 96-well plates and …

Genes critical for development and differentiation of ... - Springer

WebDec 22, 2024 · This work was supported by resources made available through the NeuroImaging and NeuroComputation Center at the Djavad Mowafaghian Centre for Brain … WebFeb 23, 2024 · Gene expression data generated by performing microarray on human post-mortem brain tissue from neurologically and neuropathologically control individuals was used for the construction of basal gene expression network using weighted gene co-expression network analysis (WGCNA; RRID:SCR_003302). collins bus ardee to dublin

Neuronal cell types, projections, and spatial organization …

WebMar 11, 2024 · GC content in the Methylobacterium sp. AMS5 genome was calculated in R v.4.0.2 (R Core Team, 2024) (RRID:SCR_001905) using the alphabetFrequency function from Biostrings v.2.46.0 (Pagès et al., 2024) (RRID:SCR_016949); for plotting, a sliding window of 5 kb was used for the full genome and 500 bp for the catabolic island region. WebAug 1, 2024 · All data analysis processes were performed using R (R Project for Statistical Computing, RRID:SCR_001905) version 3.6.1 and the R package Seurat (SEURAT, RRID:SCR_007322) version 3.1.2. ... RRID:SCR_007322) version 3.1.2. Data preprocessing and cell-type annotation. ScRNA-seq data of each of the samples involved was deposited … WebMar 6, 2024 · Balloon plots, violin plots, and heatmaps analysis results were generated with the R (version 4.0.2, RRID: SCR_001905) package Monocle 2.0, while heatmaps of differential gene expression data... collins bus hutchinson kansas

Decoding the colorectal cancer ecosystem emphasizes …

B7-H3 Suppresses Antitumor Immunity via the CCL2–CCR2–M2 …

WebRRID:SCR_001905 . Software environment and programming language for statistical computing and graphics. R is integrated suite of software facilities for data manipulation, calculation and graphical display. Can be extended via packages. Some packages are supplied with the R distribution and more are available through CRAN family.It compiles … WebSciCrunch is a collaboratively edited knowledge base about scientific resources. It is a community portal for researchers and a content management system for data and databases. It is intended to provide a common source of data to the research community and the data about Research Resource Identifiers ( RRIDs ), which can be used in … dr robert sherman urologistWebTriple plasmid transient transfection was carried out using SFG-gammaretroviral vectors (RRID : Addgene_22493). The anti B7H3 CAR-T was synthesized within SFG and contains the following components: IL-2 signal peptide, TE9 ScFv, CD8 hinge and transmembrane, CD28 endodomain, CD3zeta. collins busy ants login

"WebThe RRID index is a list of key biological reagents and resources aggregated from the most authoritative data sources for each resource type. Each of the records is also available … " - Rrid:scr_001905

Rrid:scr_001905

Heterozygous Dab1 Null Mutation Disrupts Neocortical and …

WebMay 26, 2024 · suggested: (R Project for Statistical Computing, RRID:SCR_001905) Results from OddPub : Thank you for sharing your code and data. Results from … WebOct 8, 2024 · All statistical analyses were performed using R package “stats” with R version 3.6.3 (R Project for Statistical Computing, RRID:SCR_001905). Cell proportion differences were evaluated by the Wilcoxon rank-sum test (for comparisons of two groups) or Kruskal–Wallis test (for comparisons of more than two groups).

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WebMar 11, 2024 · The rpoB tree includes five of the Methylobacterium strains carrying aromatic catabolism genes (sp. MIMD6, sp. 174MFSha1-1, sp. AM11, sp. YR596, and sp. CCH7-A2) … WebApr 13, 2024 · All statistical analysis was performed with RStudio (RRID:SCR_000432) version 1.2.5019 using R Project for Statistical Computing (RRID:SCR_001905) version 4.2.2. The Wilcoxon signed-rank test was performed to compare data from two processing methods and Pearson’s Chi-squared test was used to analyse the relationship between …

WebMice. Heterozygous yotari or wild-type females were mated with heterozygous yotari males (RRID:IMSR_RBRC05456).Noon on the day the vaginal plug was found was designated as embryonic day (E)0.5. All animal procedures were performed in accordance with the Keio University Animal Care and Use Committee’s regulations, Japanese Government Law …

WebMay 18, 2024 · Abstract. Bone marrow (BM) angiogenesis significantly influences disease progression in multiple myeloma (MM) patients and correlates with adverse prognosis. … WebApr 15, 2024 · Model reduction, parameter estimation and global sensitivity analysis tools are written in MATLAB® (RRID:SCR_001622) and require the SimBiology® toolbox. …

WebDec 22, 2024 · Computational analysis was performed in R (RRID: SCR_001905) 69 using a combination of Seurat v4 (RRID: SCR_007322) 70, 71 and custom scripts. ... (RRID: SCR_002285) using images from the Allen Mouse Brain Atlas, 35 with the following series: GAD1: 79556706; Calcrl: 74988670; ...

WebAnalyses were performed using the R software environment (RRID: SCR_001905). For in vitro functional assays, differences between groups were assessed by the Kruskal-Wallis and Dunn’s multiple comparison test using GraphPad Prism 8 (GraphPad Software, San Diego, CA, USA, RRID: SCR_002798). Three independent experiments were performed for … collins business dictionaryWebimplemented in R (RCT, 2024; RRID: SCR_001905). NBS allows the application of edgewise general linear hypothesis testing (GLHT), however when dealing with longitudinal data, the approximation is to include individual intercepts as covariates and permutation is restricted to within individual balanced datasets, i.e., each collins business systemsWebJan 1, 2024 · Single-sample gene set enrichment analysis , obtained from GenePattern software (RRID:SCR_003201, version 3.5.0), was performed to evaluate the IFNγ signature … dr. robert shields podiatristWebProper Citation: R Project for Statistical Computing (RRID:SCR_001905) Description: Software environment and programming language for statistical computing and graphics. … collins business secretsWebOct 8, 2024 · To explore cellular development, differentiation and cellular fate conversions, single-cell trajectories were constructed by Monocle2 (RRID:SCR_016339), which … collins business unitsWebApr 12, 2024 · We used samtools (ref. 36; RRID:SCR_002105) to convert the bam files to fastq and aligned all datasets to a joint hg38/mm10 reference. We filtered out all mouse sequences and removed PCR duplicates. ... (RRID:SCR_001905) and the resulting output was plotted as a heatmap using the pheatmap R package (RRID:SCR_016418; … dr robert shields cleveland clinicWebRRID:SCR_001905 Download Mentions Usage We apologize, the data for 2024 is currently unavailable for most resources. We are aware of the issue and are working to resolve it. About this Report The report results are from Research Resource Identifier (RRID) - based text mining of the literature of PubMed Central (PMC) Open Access Subset (OA Subset) . dr robert shin